Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HOXB3P14651 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.27■□□□□ 0.03
HOXB3P14651 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXB3P14651 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.27■□□□□ 0.03
HOXB3P14651 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXB3P14651 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXB3P14651 AC011477.6-201ENST00000604980 1927 ntBASIC15.27■□□□□ 0.03
HOXB3P14651 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.27■□□□□ 0.03
HOXB3P14651 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXB3P14651 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXB3P14651 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HOXB3P14651 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.27■□□□□ 0.03
HOXB3P14651 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXB3P14651 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HOXB3P14651 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.27■□□□□ 0.03
HOXB3P14651 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HOXB3P14651 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 AC007950.2-201ENST00000615045 2347 ntBASIC15.26■□□□□ 0.03
HOXB3P14651 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HOXB3P14651 LUZP4P1-201ENST00000415420 344 ntBASIC15.26■□□□□ 0.03
HOXB3P14651 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.26■□□□□ 0.03
HOXB3P14651 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.26■□□□□ 0.03
HOXB3P14651 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC15.26■□□□□ 0.03
HOXB3P14651 RPL13AP20-201ENST00000459725 609 ntBASIC15.26■□□□□ 0.03
HOXB3P14651 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC15.26■□□□□ 0.03
HOXB3P14651 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.26■□□□□ 0.03
HOXB3P14651 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 AC018754.1-201ENST00000607486 925 ntBASIC15.26■□□□□ 0.03
HOXB3P14651 AL021368.1-201ENST00000607490 540 ntBASIC15.26■□□□□ 0.03
HOXB3P14651 AC091271.1-201ENST00000611877 1162 ntBASIC15.26■□□□□ 0.03
HOXB3P14651 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HOXB3P14651 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.26■□□□□ 0.03
HOXB3P14651 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.26■□□□□ 0.03
HOXB3P14651 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXB3P14651 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXB3P14651 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.25■□□□□ 0.03
HOXB3P14651 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
HOXB3P14651 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HOXB3P14651 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXB3P14651 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
HOXB3P14651 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
HOXB3P14651 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
HOXB3P14651 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HOXB3P14651 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXB3P14651 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HOXB3P14651 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.25■□□□□ 0.03
HOXB3P14651 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXB3P14651 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXB3P14651 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXB3P14651 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXB3P14651 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.25■□□□□ 0.03
HOXB3P14651 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXB3P14651 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXB3P14651 AC010319.3-201ENST00000597028 470 ntBASIC15.25■□□□□ 0.03
HOXB3P14651 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HOXB3P14651 AC012653.2-201ENST00000621880 420 ntBASIC15.25■□□□□ 0.03
HOXB3P14651 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXB3P14651 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HOXB3P14651 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXB3P14651 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.25■□□□□ 0.03
HOXB3P14651 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HOXB3P14651 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXB3P14651 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXB3P14651 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms