RNA–Protein interactions for RNA: ENST00000519803.1

AC090541.1-201, humanhuman

TSL 3 BASIC

Gene AC090541.1, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090541.1-201ENST00000519803 AEBP2Q6ZN18 517 aaPredicted RBP33.9■■■■□ 3.02
AC090541.1-201ENST00000519803 CHIC1Q5VXU3 224 aa32.37■■■□□ 2.77
AC090541.1-201ENST00000519803 SENP3Q9H4L4 574 aaPredicted RBP28.72■■■□□ 2.19
AC090541.1-201ENST00000519803 PHF23Q9BUL5 403 aaPredicted RBP28.48■■■□□ 2.15
AC090541.1-201ENST00000519803 FOXD1Q16676 465 aa26.85■■□□□ 1.89
AC090541.1-201ENST00000519803 PLPPR3Q6T4P5 718 aa25.92■■□□□ 1.74
AC090541.1-201ENST00000519803 PPP6R1Q9UPN7 881 aa25.36■■□□□ 1.65
AC090541.1-201ENST00000519803 ADRA2BP18089 450 aa25.23■■□□□ 1.63
AC090541.1-201ENST00000519803 PIAS4Q8N2W9 510 aaPredicted RBP25.05■■□□□ 1.6
AC090541.1-201ENST00000519803 MSH5O43196 834 aa24.9■■□□□ 1.58
AC090541.1-201ENST00000519803 POTEDQ86YR6 584 aa23.96■■□□□ 1.43
AC090541.1-201ENST00000519803 MAPK8IP2Q13387 824 aaPredicted RBP23.13■■□□□ 1.29
AC090541.1-201ENST00000519803 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
AC090541.1-201ENST00000519803 DMRT2Q9Y5R5 561 aa22.87■■□□□ 1.25
AC090541.1-201ENST00000519803 PPP4R3CPQ6ZMV5 832 aa22.79■■□□□ 1.24
AC090541.1-201ENST00000519803 CNKSR2Q8WXI2 1034 aa22.28■■□□□ 1.16
AC090541.1-201ENST00000519803 HOXD11P31277 338 aaPredicted RBP22.17■■□□□ 1.14
AC090541.1-201ENST00000519803 RNF216Q9NWF9 866 aaPredicted RBP22.02■■□□□ 1.12
AC090541.1-201ENST00000519803 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
AC090541.1-201ENST00000519803 DCAF8L1A6NGE4 600 aa21.79■■□□□ 1.08
AC090541.1-201ENST00000519803 NPM3O75607 178 aaKnown RBP21.7■■□□□ 1.06
AC090541.1-201ENST00000519803 KCNA4P22459 653 aa21.53■■□□□ 1.04
AC090541.1-201ENST00000519803 RNF39Q9H2S5 420 aa21.35■■□□□ 1.01
AC090541.1-201ENST00000519803 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
AC090541.1-201ENST00000519803 CACNB1Q02641 598 aaPredicted RBP21.2■□□□□ 0.98
AC090541.1-201ENST00000519803 C1QBPQ07021 282 aaKnown RBP21■□□□□ 0.95
AC090541.1-201ENST00000519803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.95
AC090541.1-201ENST00000519803 SLC4A2P04920 1241 aa20.72■□□□□ 0.91
AC090541.1-201ENST00000519803 U3KPZ7 1027 aaPredicted RBP20.7■□□□□ 0.9
AC090541.1-201ENST00000519803 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
AC090541.1-201ENST00000519803 SLC4A1APQ9BWU0 796 aaKnown RBP20.3■□□□□ 0.84
AC090541.1-201ENST00000519803 CAPN15O75808 1086 aa20.16■□□□□ 0.82
AC090541.1-201ENST00000519803 DSG3P32926 999 aa20.09■□□□□ 0.81
AC090541.1-201ENST00000519803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
AC090541.1-201ENST00000519803 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
AC090541.1-201ENST00000519803 MYCNP04198 464 aaPredicted RBP19.99■□□□□ 0.79
AC090541.1-201ENST00000519803 SAMD1Q6SPF0 538 aaPredicted RBP19.98■□□□□ 0.79
AC090541.1-201ENST00000519803 APLP2Q06481 763 aa19.95■□□□□ 0.78
AC090541.1-201ENST00000519803 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
AC090541.1-201ENST00000519803 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
AC090541.1-201ENST00000519803 ZNF219Q9P2Y4 722 aaPredicted RBP19.87■□□□□ 0.77
AC090541.1-201ENST00000519803 ZBTB22O15209 634 aa19.86■□□□□ 0.77
AC090541.1-201ENST00000519803 ABCB7O75027 752 aa19.77■□□□□ 0.76
AC090541.1-201ENST00000519803 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
AC090541.1-201ENST00000519803 POLA2Q14181 598 aa19.49■□□□□ 0.71
AC090541.1-201ENST00000519803 ATXN8OSP0DMR3 200 aa19.3■□□□□ 0.68
AC090541.1-201ENST00000519803 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
AC090541.1-201ENST00000519803 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
AC090541.1-201ENST00000519803 ZBTB12Q9Y330 459 aaPredicted RBP19.01■□□□□ 0.63
AC090541.1-201ENST00000519803 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
AC090541.1-201ENST00000519803 OSCARQ8IYS5 282 aa18.85■□□□□ 0.61
AC090541.1-201ENST00000519803 POTEHQ6S545 545 aa18.78■□□□□ 0.6
AC090541.1-201ENST00000519803 MKRN4PQ13434 485 aaPredicted RBP18.74■□□□□ 0.59
AC090541.1-201ENST00000519803 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
AC090541.1-201ENST00000519803 FBLN2P98095 1184 aa18.66■□□□□ 0.58
AC090541.1-201ENST00000519803 CHRDL2Q6WN34 429 aa18.58■□□□□ 0.56
AC090541.1-201ENST00000519803 REM2Q8IYK8 340 aaPredicted RBP18.57■□□□□ 0.56
AC090541.1-201ENST00000519803 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
AC090541.1-201ENST00000519803 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
AC090541.1-201ENST00000519803 SPDYE2Q495Y8 402 aa18.51■□□□□ 0.55
AC090541.1-201ENST00000519803 PITPNM1O00562 1244 aa18.37■□□□□ 0.53
AC090541.1-201ENST00000519803 SSUH2Q9Y2M2 353 aa18.36■□□□□ 0.53
AC090541.1-201ENST00000519803 ZNF692Q9BU19 519 aaPredicted RBP18.33■□□□□ 0.52
AC090541.1-201ENST00000519803 PIP4P2Q8N4L2 257 aa18.24■□□□□ 0.51
AC090541.1-201ENST00000519803 FXR2P51116 673 aaKnown RBP eCLIP18.19■□□□□ 0.5
AC090541.1-201ENST00000519803 SPDYE1Q8NFV5 336 aaPredicted RBP18.1■□□□□ 0.49
AC090541.1-201ENST00000519803 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
AC090541.1-201ENST00000519803 CLEC11AQ9Y240 323 aa18.05■□□□□ 0.48
AC090541.1-201ENST00000519803 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
AC090541.1-201ENST00000519803 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
AC090541.1-201ENST00000519803 PRR29P0C7W0 189 aa17.8■□□□□ 0.44
AC090541.1-201ENST00000519803 HAX1O00165 279 aa17.76■□□□□ 0.43
AC090541.1-201ENST00000519803 CHADLQ6NUI6 762 aa17.76■□□□□ 0.43
AC090541.1-201ENST00000519803 EVX2Q03828 476 aa17.73■□□□□ 0.43
AC090541.1-201ENST00000519803 SP7Q8TDD2 431 aaPredicted RBP17.73■□□□□ 0.43
AC090541.1-201ENST00000519803 PROM2Q8N271 834 aa17.6■□□□□ 0.41
AC090541.1-201ENST00000519803 C19orf67A6NJJ6 358 aa17.59■□□□□ 0.41
AC090541.1-201ENST00000519803 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
AC090541.1-201ENST00000519803 CREBZFQ9NS37 354 aa17.51■□□□□ 0.39
AC090541.1-201ENST00000519803 FARP1Q9Y4F1 1045 aaPredicted RBP17.51■□□□□ 0.39
AC090541.1-201ENST00000519803 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
AC090541.1-201ENST00000519803 MNX1P50219 401 aaPredicted RBP17.3■□□□□ 0.36
AC090541.1-201ENST00000519803 GABBR2O75899 941 aa17.26■□□□□ 0.35
AC090541.1-201ENST00000519803 FKBP8Q14318 412 aa17.26■□□□□ 0.35
AC090541.1-201ENST00000519803 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
AC090541.1-201ENST00000519803 ZNF579Q8NAF0 562 aaKnown RBP17.08■□□□□ 0.32
AC090541.1-201ENST00000519803 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
AC090541.1-201ENST00000519803 MIER1Q8N108 512 aa17■□□□□ 0.31
AC090541.1-201ENST00000519803 CLCN6P51797 869 aa16.99■□□□□ 0.31
AC090541.1-201ENST00000519803 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
AC090541.1-201ENST00000519803 PHF12Q96QT6 1004 aa16.92■□□□□ 0.3
AC090541.1-201ENST00000519803 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
AC090541.1-201ENST00000519803 GALR2O43603 387 aaPredicted RBP16.89■□□□□ 0.29
AC090541.1-201ENST00000519803 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
AC090541.1-201ENST00000519803 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
AC090541.1-201ENST00000519803 TSPYL2Q9H2G4 693 aaPredicted RBP16.82■□□□□ 0.28
AC090541.1-201ENST00000519803 RASEFQ8IZ41 740 aa16.81■□□□□ 0.28
AC090541.1-201ENST00000519803 CCDC61Q9Y6R9 512 aa16.81■□□□□ 0.28
AC090541.1-201ENST00000519803 FBXO3Q9UK99 471 aa16.76■□□□□ 0.27
AC090541.1-201ENST00000519803 NUBP1P53384 320 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms