Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD48P09326 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CD48P09326 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CD48P09326 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD48P09326 SPDYE19P-201ENST00000338590 713 ntBASIC15.97■□□□□ 0.15
CD48P09326 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 GAPDHP40-201ENST00000505218 1006 ntBASIC15.97■□□□□ 0.15
CD48P09326 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.97■□□□□ 0.15
CD48P09326 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.97■□□□□ 0.15
CD48P09326 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CD48P09326 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CD48P09326 AC011467.4-201ENST00000594891 528 ntBASIC15.97■□□□□ 0.15
CD48P09326 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD48P09326 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CD48P09326 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.97■□□□□ 0.15
CD48P09326 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD48P09326 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.97■□□□□ 0.15
CD48P09326 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CD48P09326 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.96■□□□□ 0.15
CD48P09326 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.96■□□□□ 0.15
CD48P09326 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CD48P09326 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.96■□□□□ 0.15
CD48P09326 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.96■□□□□ 0.15
CD48P09326 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CD48P09326 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.96■□□□□ 0.15
CD48P09326 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CD48P09326 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.96■□□□□ 0.15
CD48P09326 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.96■□□□□ 0.15
CD48P09326 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CD48P09326 RARRES2P5-201ENST00000564013 466 ntBASIC15.96■□□□□ 0.15
CD48P09326 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.96■□□□□ 0.15
CD48P09326 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.96■□□□□ 0.15
CD48P09326 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 LINC00552-201ENST00000625151 2579 ntBASIC15.96■□□□□ 0.15
CD48P09326 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.96■□□□□ 0.15
CD48P09326 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD48P09326 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CD48P09326 AC012508.2-201ENST00000567613 1472 ntBASIC15.96■□□□□ 0.14
CD48P09326 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.96■□□□□ 0.14
CD48P09326 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD48P09326 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CD48P09326 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CD48P09326 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD48P09326 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CD48P09326 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CD48P09326 CICP14-201ENST00000629111 2732 ntBASIC15.96■□□□□ 0.14
CD48P09326 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 AL157414.3-201ENST00000624276 1954 ntBASIC15.95■□□□□ 0.14
CD48P09326 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms