Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DQA2P01906 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 AP000347.1-202ENST00000435868 847 ntBASIC13.92□□□□□ -0.18
HLA-DQA2P01906 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HLA-DQA2P01906 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLA-DQA2P01906 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms