Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTNND1O60716 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTNND1O60716 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.9■□□□□ 0.46
CTNND1O60716 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.9■□□□□ 0.46
CTNND1O60716 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.9■□□□□ 0.46
CTNND1O60716 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTNND1O60716 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTNND1O60716 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.9■□□□□ 0.46
CTNND1O60716 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTNND1O60716 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTNND1O60716 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CTNND1O60716 AL662890.1-201ENST00000396818 632 ntBASIC17.9■□□□□ 0.46
CTNND1O60716 RPL5P21-201ENST00000404620 815 ntBASIC17.9■□□□□ 0.46
CTNND1O60716 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTNND1O60716 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.9■□□□□ 0.46
CTNND1O60716 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.9■□□□□ 0.46
CTNND1O60716 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.9■□□□□ 0.46
CTNND1O60716 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.9■□□□□ 0.46
CTNND1O60716 AP003171.2-201ENST00000528208 925 ntBASIC17.9■□□□□ 0.46
CTNND1O60716 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTNND1O60716 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 AC006449.5-201ENST00000610658 2098 ntBASIC17.9■□□□□ 0.46
CTNND1O60716 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.9■□□□□ 0.46
CTNND1O60716 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.9■□□□□ 0.46
CTNND1O60716 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTNND1O60716 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CTNND1O60716 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.89■□□□□ 0.45
CTNND1O60716 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CTNND1O60716 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.89■□□□□ 0.45
CTNND1O60716 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.89■□□□□ 0.45
CTNND1O60716 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.89■□□□□ 0.45
CTNND1O60716 AL391280.1-201ENST00000506969 1062 ntBASIC17.89■□□□□ 0.45
CTNND1O60716 AC106820.3-201ENST00000561653 397 ntBASIC17.89■□□□□ 0.45
CTNND1O60716 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.89■□□□□ 0.45
CTNND1O60716 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.89■□□□□ 0.45
CTNND1O60716 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNND1O60716 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.89■□□□□ 0.45
CTNND1O60716 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNND1O60716 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CTNND1O60716 KRT8P4-201ENST00000509735 1454 ntBASIC17.88■□□□□ 0.45
CTNND1O60716 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTNND1O60716 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTNND1O60716 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNND1O60716 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CTNND1O60716 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNND1O60716 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNND1O60716 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CTNND1O60716 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.88■□□□□ 0.45
CTNND1O60716 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNND1O60716 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNND1O60716 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CTNND1O60716 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTNND1O60716 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTNND1O60716 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNND1O60716 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CTNND1O60716 AC104457.1-201ENST00000401024 814 ntBASIC17.88■□□□□ 0.45
CTNND1O60716 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CTNND1O60716 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.88■□□□□ 0.45
CTNND1O60716 CHMP1AP1-201ENST00000445563 662 ntBASIC17.88■□□□□ 0.45
CTNND1O60716 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.88■□□□□ 0.45
CTNND1O60716 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.88■□□□□ 0.45
CTNND1O60716 MIR3619-201ENST00000579667 83 ntBASIC17.88■□□□□ 0.45
CTNND1O60716 NDUFV2P1-201ENST00000596415 907 ntBASIC17.88■□□□□ 0.45
CTNND1O60716 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CTNND1O60716 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CTNND1O60716 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.88■□□□□ 0.45
CTNND1O60716 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.88■□□□□ 0.45
CTNND1O60716 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNND1O60716 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNND1O60716 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms