Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.41□□□□□ -0.42
UPK2O00526 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
UPK2O00526 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK2O00526 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 TOMM22P5-201ENST00000416399 439 ntBASIC12.41□□□□□ -0.42
UPK2O00526 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK2O00526 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.41□□□□□ -0.42
UPK2O00526 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK2O00526 KRT18P43-201ENST00000469825 1281 ntBASIC12.41□□□□□ -0.42
UPK2O00526 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK2O00526 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.41□□□□□ -0.42
UPK2O00526 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.41□□□□□ -0.42
UPK2O00526 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK2O00526 LINC01115-203ENST00000606068 577 ntBASIC12.41□□□□□ -0.42
UPK2O00526 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK2O00526 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 LINC00552-201ENST00000625151 2579 ntBASIC12.41□□□□□ -0.42
UPK2O00526 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK2O00526 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK2O00526 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
UPK2O00526 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
UPK2O00526 AC007686.3-201ENST00000619017 3487 ntBASIC12.41□□□□□ -0.42
UPK2O00526 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.4□□□□□ -0.42
UPK2O00526 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
UPK2O00526 AC007326.2-201ENST00000624224 7579 ntBASIC12.4□□□□□ -0.42
UPK2O00526 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
UPK2O00526 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
UPK2O00526 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.4□□□□□ -0.42
UPK2O00526 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.4□□□□□ -0.42
UPK2O00526 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.4□□□□□ -0.42
UPK2O00526 AP006288.1-201ENST00000446065 395 ntBASIC12.4□□□□□ -0.42
UPK2O00526 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
UPK2O00526 RN7SL618P-201ENST00000477850 296 ntBASIC12.4□□□□□ -0.42
UPK2O00526 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.4□□□□□ -0.42
UPK2O00526 AL512361.1-201ENST00000554200 418 ntBASIC12.4□□□□□ -0.42
UPK2O00526 SNHG9-202ENST00000564014 471 ntBASIC12.4□□□□□ -0.42
UPK2O00526 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 AC074044.1-201ENST00000609673 707 ntBASIC12.4□□□□□ -0.42
UPK2O00526 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.4□□□□□ -0.42
UPK2O00526 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.4□□□□□ -0.42
UPK2O00526 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 AL121723.1-201ENST00000445194 1519 ntBASIC12.4□□□□□ -0.42
UPK2O00526 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.4□□□□□ -0.42
UPK2O00526 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UPK2O00526 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK2O00526 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms