Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 AC007686.3-201ENST00000619017 3487 ntBASIC16.5■□□□□ 0.23
FOXN3O00409 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FOXN3O00409 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXN3O00409 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXN3O00409 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXN3O00409 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXN3O00409 GNAQP1-201ENST00000444815 1067 ntBASIC16.5■□□□□ 0.23
FOXN3O00409 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXN3O00409 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.5■□□□□ 0.23
FOXN3O00409 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 DOC2GP-202ENST00000514950 1163 ntBASIC16.5■□□□□ 0.23
FOXN3O00409 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXN3O00409 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXN3O00409 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXN3O00409 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXN3O00409 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
FOXN3O00409 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXN3O00409 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXN3O00409 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXN3O00409 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXN3O00409 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXN3O00409 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXN3O00409 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
FOXN3O00409 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 SPDYE19P-201ENST00000338590 713 ntBASIC16.49■□□□□ 0.23
FOXN3O00409 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 UGT1A2P-201ENST00000454886 866 ntBASIC16.49■□□□□ 0.23
FOXN3O00409 RN7SL399P-201ENST00000471648 279 ntBASIC16.49■□□□□ 0.23
FOXN3O00409 CYMP-203ENST00000474680 1263 ntBASIC16.49■□□□□ 0.23
FOXN3O00409 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXN3O00409 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
FOXN3O00409 SAMD11P1-201ENST00000571429 661 ntBASIC16.49■□□□□ 0.23
FOXN3O00409 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXN3O00409 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXN3O00409 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXN3O00409 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXN3O00409 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXN3O00409 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXN3O00409 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXN3O00409 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXN3O00409 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXN3O00409 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms