Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 OR8S1-201ENST00000310194 1080 ntBASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 AC004987.2-201ENST00000395959 1148 ntBASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 AC011495.1-201ENST00000498085 584 ntBASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB6Q9Y5F9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 AP006294.1-201ENST00000415407 339 ntBASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 GNAQP1-201ENST00000444815 1067 ntBASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 EEF1DP4-201ENST00000446006 880 ntBASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 AC243562.2-201ENST00000561247 970 ntBASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 AL359881.2-201ENST00000602973 570 ntBASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB6Q9Y5F9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGB6Q9Y5F9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGB6Q9Y5F9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGB6Q9Y5F9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGB6Q9Y5F9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGB6Q9Y5F9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGB6Q9Y5F9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGB6Q9Y5F9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGB6Q9Y5F9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms