Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DUX4Q9UBX2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 FAM58DP-201ENST00000428076 619 ntBASIC13.69□□□□□ -0.22
DUX4Q9UBX2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 CNN2P11-201ENST00000429351 262 ntBASIC13.69□□□□□ -0.22
DUX4Q9UBX2 AC093724.1-201ENST00000448659 1027 ntBASIC13.69□□□□□ -0.22
DUX4Q9UBX2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 UXT-AS1-201ENST00000590504 1525 ntBASIC13.69□□□□□ -0.22
DUX4Q9UBX2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUX4Q9UBX2 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AL627223.1-201ENST00000416693 442 ntBASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AC005237.2-201ENST00000434368 219 ntBASIC13.68□□□□□ -0.22
DUX4Q9UBX2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 IGHV3-62-201ENST00000520057 340 ntBASIC13.68□□□□□ -0.22
DUX4Q9UBX2 SLC25A39P2-201ENST00000537614 270 ntBASIC13.68□□□□□ -0.22
DUX4Q9UBX2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 SNHG9-202ENST00000564014 471 ntBASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AP000842.3-202ENST00000569238 1080 ntBASIC13.68□□□□□ -0.22
DUX4Q9UBX2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AC008267.7-201ENST00000624570 1194 ntBASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms