Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 AC073413.1-201ENST00000603927 732 ntBASIC16.26■□□□□ 0.19
TLR9Q9NR96 AC097724.1-201ENST00000609581 426 ntBASIC16.26■□□□□ 0.19
TLR9Q9NR96 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 AC103702.1-201ENST00000548801 2630 ntBASIC16.26■□□□□ 0.19
TLR9Q9NR96 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TLR9Q9NR96 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR9Q9NR96 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 KRT8P4-201ENST00000509735 1454 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 POM121L8P-201ENST00000417732 1281 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 AL008707.1-201ENST00000422498 534 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 EIF3FP3-201ENST00000434851 1086 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 POM121L9P-203ENST00000441984 1285 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 SPTLC1P5-201ENST00000450718 252 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 RPS2P36-201ENST00000456516 831 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 RN7SL720P-201ENST00000488178 304 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 MIR7845-201ENST00000618396 99 ntBASIC16.25■□□□□ 0.19
TLR9Q9NR96 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR9Q9NR96 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.25■□□□□ 0.19
TLR9Q9NR96 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.24■□□□□ 0.19
TLR9Q9NR96 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TLR9Q9NR96 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.24■□□□□ 0.19
TLR9Q9NR96 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms