Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 CICP23-201ENST00000605013 2741 ntBASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRRC40Q9H9A6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
LRRC40Q9H9A6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 AC006538.3-201ENST00000612495 578 ntBASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRRC40Q9H9A6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 AC009407.1-201ENST00000568958 598 ntBASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC40Q9H9A6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC40Q9H9A6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms