Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC078991.1-201ENST00000437297 610 ntBASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AC114501.1-201ENST00000445949 172 ntBASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 ALG3P1-201ENST00000508806 1114 ntBASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AC135983.4-201ENST00000564116 1262 ntBASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 OR2K2-202ENST00000374428 1038 ntBASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 RN7SL8P-201ENST00000461771 266 ntBASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 AC138894.2-201ENST00000602838 371 ntBASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 AC009884.2-201ENST00000603110 324 ntBASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 MIR6720-201ENST00000611664 98 ntBASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 AL157813.1-201ENST00000612996 587 ntBASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 AC099398.1-201ENST00000567919 2776 ntBASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP4Q9C0A0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 RN7SL67P-201ENST00000492147 296 ntBASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP4Q9C0A0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 AL627231.1-201ENST00000394467 1125 ntBASIC19.02■□□□□ 0.64
CNTNAP4Q9C0A0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms