Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 DRD5P1-201ENST00000456605 1438 ntBASIC18.26■□□□□ 0.51
NEK1Q96PY6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 AC011270.2-201ENST00000624293 2550 ntBASIC18.26■□□□□ 0.51
NEK1Q96PY6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 SERBP1P5-201ENST00000510079 1181 ntBASIC18.26■□□□□ 0.51
NEK1Q96PY6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 SAMD11P1-201ENST00000571429 661 ntBASIC18.26■□□□□ 0.51
NEK1Q96PY6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 AC009118.2-201ENST00000613275 655 ntBASIC18.26■□□□□ 0.51
NEK1Q96PY6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 LINC02228-204ENST00000642115 2962 ntBASIC18.26■□□□□ 0.51
NEK1Q96PY6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 ACE3P-201ENST00000423435 1973 ntBASIC18.26■□□□□ 0.51
NEK1Q96PY6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEK1Q96PY6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.26■□□□□ 0.51
NEK1Q96PY6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 TSPY16P-201ENST00000449843 468 ntBASIC18.25■□□□□ 0.51
NEK1Q96PY6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 AC093004.1-201ENST00000508850 424 ntBASIC18.25■□□□□ 0.51
NEK1Q96PY6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 AC190387.1-201ENST00000551683 408 ntBASIC18.25■□□□□ 0.51
NEK1Q96PY6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 RRP7BP-205ENST00000566851 833 ntBASIC18.25■□□□□ 0.51
NEK1Q96PY6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 AL662799.1-202ENST00000614205 422 ntBASIC18.25■□□□□ 0.51
NEK1Q96PY6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
NEK1Q96PY6 CICP24-201ENST00000605464 2705 ntBASIC18.25■□□□□ 0.51
NEK1Q96PY6 AJ011931.1-201ENST00000618749 2492 ntBASIC18.25■□□□□ 0.51
NEK1Q96PY6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.25■□□□□ 0.51
NEK1Q96PY6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEK1Q96PY6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms