Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 AC092171.5-201ENST00000608012 942 ntBASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 AC004923.1-202ENST00000642106 209 ntBASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC23.54■■□□□ 1.36
CFAP43Q8NDM7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 AL138725.1-201ENST00000407347 1314 ntBASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 API5-202ENST00000420461 2009 ntTSL 2 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 AL359258.3-201ENST00000622910 2331 ntBASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 AL162426.1-201ENST00000624141 743 ntBASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 AL360270.3-201ENST00000609118 1348 ntBASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC23.53■■□□□ 1.36
CFAP43Q8NDM7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 AL358472.3-201ENST00000608147 415 ntBASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 AC009093.2-202ENST00000620513 2079 ntBASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
CFAP43Q8NDM7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CFAP43Q8NDM7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CFAP43Q8NDM7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 RN7SKP214-201ENST00000364208 315 ntBASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 AC090857.1-201ENST00000527400 390 ntBASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 MIR4683-201ENST00000579659 81 ntBASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 TUBB8P8-201ENST00000458717 1058 ntBASIC23.51■■□□□ 1.35
CFAP43Q8NDM7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms