Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 AC098850.1-201ENST00000419919 790 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 RN7SL837P-201ENST00000463010 287 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 SLED1-202ENST00000512051 380 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 AP005482.1-201ENST00000563722 1273 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 AC093726.1-201ENST00000608064 963 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 AC133552.6-201ENST00000613406 534 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 REXO1L6P-201ENST00000603433 1515 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 FAM86MP-201ENST00000340703 885 ntBASIC16.23■□□□□ 0.19
RNF43Q68DV7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 KRT18P64-201ENST00000434946 1219 ntBASIC16.23■□□□□ 0.19
RNF43Q68DV7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 KRT223P-202ENST00000449164 1292 ntBASIC16.23■□□□□ 0.19
RNF43Q68DV7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 TMEM261P1-201ENST00000604899 340 ntBASIC16.23■□□□□ 0.19
RNF43Q68DV7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.23■□□□□ 0.19
RNF43Q68DV7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RNF43Q68DV7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF43Q68DV7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 AC063926.3-201ENST00000624734 5658 ntBASIC16.22■□□□□ 0.19
RNF43Q68DV7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 ELK1P1-201ENST00000485699 580 ntBASIC16.22■□□□□ 0.19
RNF43Q68DV7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF43Q68DV7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF43Q68DV7 MIR4259-201ENST00000584466 101 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms