Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 MIR4750-201ENST00000584564 56 ntBASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AC133540.1-201ENST00000620845 1019 ntBASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC22.7■■□□□ 1.23
CDC42BPAQ5VT25 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CDC42BPAQ5VT25 WARS-232ENST00000556645 2508 ntTSL 5 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 BX088702.1-201ENST00000610784 235 ntBASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 WT1-AS_6.1-201ENST00000614919 121 ntBASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC22.7■■□□□ 1.22
CDC42BPAQ5VT25 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 RN7SL8P-201ENST00000461771 266 ntBASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPAQ5VT25 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 NCR3-202ENST00000376071 541 ntTSL 5 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 SKA2-202ENST00000437036 625 ntTSL 2 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 IGHV3-37-201ENST00000518544 340 ntBASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 FRMPD2B-201ENST00000431305 1347 ntBASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 KRT8P31-201ENST00000504812 1408 ntBASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 RN7SL258P-201ENST00000478664 300 ntBASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 PHBP15-201ENST00000574228 665 ntBASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 AC103691.2-201ENST00000618824 433 ntBASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 REXO1L2P-201ENST00000425429 2069 ntBASIC22.68■■□□□ 1.22
CDC42BPAQ5VT25 AL118508.1-201ENST00000613502 2345 ntBASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 RBM8B-201ENST00000555532 525 ntBASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms