Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 AC126365.1-201ENST00000578585 1514 ntBASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AL691432.1-201ENST00000596308 1422 ntBASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AC004987.2-201ENST00000395959 1148 ntBASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AC243562.2-201ENST00000561247 970 ntBASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AC138969.2-201ENST00000532739 9932 ntBASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AC005840.4-201ENST00000541242 2494 ntBASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ATPAF1Q5TC12 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 CNN2P2-201ENST00000443536 909 ntBASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 CNN2P3-201ENST00000450201 906 ntBASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 AC105021.1-202ENST00000570572 669 ntBASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 MIR4453-201ENST00000584019 89 ntBASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 AC003101.2-201ENST00000612557 442 ntBASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 AL136317.3-201ENST00000618497 906 ntBASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ATPAF1Q5TC12 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms