Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KHDC3LQ587J8 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KHDC3LQ587J8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KHDC3LQ587J8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KHDC3LQ587J8 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.39□□□□□ -0.43
KHDC3LQ587J8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
KHDC3LQ587J8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 AC073621.1-201ENST00000392730 636 ntBASIC12.38□□□□□ -0.43
KHDC3LQ587J8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 AC021087.4-201ENST00000563761 564 ntBASIC12.38□□□□□ -0.43
KHDC3LQ587J8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 AL121772.3-201ENST00000610840 674 ntBASIC12.38□□□□□ -0.43
KHDC3LQ587J8 ACTL9-202ENST00000612068 1252 ntBASIC12.38□□□□□ -0.43
KHDC3LQ587J8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.38□□□□□ -0.43
KHDC3LQ587J8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.38□□□□□ -0.43
KHDC3LQ587J8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KHDC3LQ587J8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 PMS2P7-201ENST00000506558 1336 ntBASIC12.37□□□□□ -0.43
KHDC3LQ587J8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 MST1P2-201ENST00000457982 2291 ntBASIC12.37□□□□□ -0.43
KHDC3LQ587J8 AC097359.2-201ENST00000604992 2389 ntBASIC12.37□□□□□ -0.43
KHDC3LQ587J8 AL589702.1-201ENST00000641229 1509 ntBASIC12.37□□□□□ -0.43
KHDC3LQ587J8 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 FAM185BP-201ENST00000443595 716 ntBASIC12.37□□□□□ -0.43
KHDC3LQ587J8 OR7E14P-202ENST00000530490 1290 ntBASIC12.37□□□□□ -0.43
KHDC3LQ587J8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 AC243562.2-201ENST00000561247 970 ntBASIC12.37□□□□□ -0.43
KHDC3LQ587J8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 ACE3P-201ENST00000423435 1973 ntBASIC12.37□□□□□ -0.43
KHDC3LQ587J8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.37□□□□□ -0.43
KHDC3LQ587J8 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms