Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 OR2K2-202ENST00000374428 1038 ntBASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 Z69890.1-201ENST00000382990 339 ntBASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 AL592076.1-201ENST00000424448 303 ntBASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 AL118516.1-201ENST00000564152 670 ntBASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SNORD3B-2-202ENST00000571722 791 ntBASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 CAP2P1-201ENST00000557743 1390 ntBASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 AC100827.2-201ENST00000563214 1194 ntBASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 RPL17P45-201ENST00000586289 509 ntBASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 AL162426.1-201ENST00000624141 743 ntBASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 AL592424.1-201ENST00000563624 1536 ntBASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO4Q2I0M5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms