Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
CENPAP49450 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.11□□□□□ -0.15
CENPAP49450 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.11□□□□□ -0.15
CENPAP49450 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CENPAP49450 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
CENPAP49450 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.11□□□□□ -0.15
CENPAP49450 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.11□□□□□ -0.15
CENPAP49450 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.11□□□□□ -0.15
CENPAP49450 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.11□□□□□ -0.15
CENPAP49450 AC055717.3-201ENST00000622967 595 ntBASIC14.11□□□□□ -0.15
CENPAP49450 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CENPAP49450 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CENPAP49450 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.11□□□□□ -0.15
CENPAP49450 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CENPAP49450 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CENPAP49450 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CENPAP49450 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.1□□□□□ -0.15
CENPAP49450 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CENPAP49450 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CENPAP49450 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CENPAP49450 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.1□□□□□ -0.15
CENPAP49450 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CENPAP49450 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 RPL5P21-201ENST00000404620 815 ntBASIC14.1□□□□□ -0.15
CENPAP49450 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CENPAP49450 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
CENPAP49450 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.1□□□□□ -0.15
CENPAP49450 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.1□□□□□ -0.15
CENPAP49450 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.1□□□□□ -0.15
CENPAP49450 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.1□□□□□ -0.15
CENPAP49450 MIR4469-201ENST00000583919 79 ntBASIC14.1□□□□□ -0.15
CENPAP49450 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 AC105339.1-204ENST00000636249 355 ntBASIC14.1□□□□□ -0.15
CENPAP49450 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CENPAP49450 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CENPAP49450 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.1□□□□□ -0.15
CENPAP49450 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CENPAP49450 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CENPAP49450 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms