Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.27□□□□□ -0.28
CCL1P22362 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.27□□□□□ -0.28
CCL1P22362 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.27□□□□□ -0.28
CCL1P22362 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CCL1P22362 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CCL1P22362 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL1P22362 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CCL1P22362 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL1P22362 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL1P22362 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL1P22362 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL1P22362 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL1P22362 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL1P22362 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL1P22362 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 AL158212.4-201ENST00000624062 1286 ntBASIC13.27□□□□□ -0.29
CCL1P22362 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CCL1P22362 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
CCL1P22362 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCL1P22362 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 AL360270.3-201ENST00000609118 1348 ntBASIC13.27□□□□□ -0.29
CCL1P22362 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CCL1P22362 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL1P22362 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
CCL1P22362 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL1P22362 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL1P22362 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CCL1P22362 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL1P22362 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL1P22362 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL1P22362 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.26□□□□□ -0.29
CCL1P22362 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 BTBD7P1-201ENST00000447253 1453 ntBASIC13.26□□□□□ -0.29
CCL1P22362 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL1P22362 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL1P22362 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 AC004066.1-201ENST00000502488 802 ntBASIC13.26□□□□□ -0.29
CCL1P22362 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 TIMM17BP1-201ENST00000545713 516 ntBASIC13.26□□□□□ -0.29
CCL1P22362 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL1P22362 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL1P22362 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 AC100757.3-201ENST00000622361 1406 ntBASIC13.26□□□□□ -0.29
CCL1P22362 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 AL359258.3-201ENST00000622910 2331 ntBASIC13.26□□□□□ -0.29
CCL1P22362 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL1P22362 AC079781.4-201ENST00000641908 219 ntBASIC13.26□□□□□ -0.29
CCL1P22362 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms