Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 AC004461.1-201ENST00000412461 403 ntBASIC14.4□□□□□ -0.1
TNFRSF1BP20333 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 GPS2P2-201ENST00000430745 888 ntBASIC14.4□□□□□ -0.1
TNFRSF1BP20333 RBPMS2P1-201ENST00000437762 623 ntBASIC14.4□□□□□ -0.1
TNFRSF1BP20333 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 MTDHP5-201ENST00000598980 586 ntBASIC14.4□□□□□ -0.1
TNFRSF1BP20333 RN7SL828P-201ENST00000607615 303 ntBASIC14.4□□□□□ -0.1
TNFRSF1BP20333 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF1BP20333 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 AC018529.2-202ENST00000611482 3087 ntBASIC14.39□□□□□ -0.11
TNFRSF1BP20333 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 SPDYE17-201ENST00000412399 783 ntBASIC14.39□□□□□ -0.11
TNFRSF1BP20333 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 AL627223.1-201ENST00000416693 442 ntBASIC14.39□□□□□ -0.11
TNFRSF1BP20333 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 KRT18P64-201ENST00000434946 1219 ntBASIC14.39□□□□□ -0.11
TNFRSF1BP20333 SPDYE14P-201ENST00000442619 822 ntBASIC14.39□□□□□ -0.11
TNFRSF1BP20333 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TNFRSF1BP20333 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms