Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
SYN1P17600 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SYN1P17600 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SYN1P17600 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SYN1P17600 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 AC106886.4-201ENST00000623557 2502 ntBASIC16.56■□□□□ 0.24
SYN1P17600 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SYN1P17600 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.56■□□□□ 0.24
SYN1P17600 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.56■□□□□ 0.24
SYN1P17600 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.56■□□□□ 0.24
SYN1P17600 AL592076.1-201ENST00000424448 303 ntBASIC16.56■□□□□ 0.24
SYN1P17600 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.56■□□□□ 0.24
SYN1P17600 VDAC1P1-201ENST00000439229 848 ntBASIC16.56■□□□□ 0.24
SYN1P17600 RN7SL258P-201ENST00000478664 300 ntBASIC16.56■□□□□ 0.24
SYN1P17600 AP003398.1-201ENST00000531124 318 ntBASIC16.56■□□□□ 0.24
SYN1P17600 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.56■□□□□ 0.24
SYN1P17600 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.56■□□□□ 0.24
SYN1P17600 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.56■□□□□ 0.24
SYN1P17600 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.56■□□□□ 0.24
SYN1P17600 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.56■□□□□ 0.24
SYN1P17600 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.56■□□□□ 0.24
SYN1P17600 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.56■□□□□ 0.24
SYN1P17600 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SYN1P17600 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.56■□□□□ 0.24
SYN1P17600 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYN1P17600 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.55■□□□□ 0.24
SYN1P17600 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SYN1P17600 MBLAC2-202ENST00000514906 1936 ntBASIC16.55■□□□□ 0.24
SYN1P17600 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.55■□□□□ 0.24
SYN1P17600 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.55■□□□□ 0.24
SYN1P17600 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SYN1P17600 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.55■□□□□ 0.24
SYN1P17600 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.55■□□□□ 0.24
SYN1P17600 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.55■□□□□ 0.24
SYN1P17600 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 AC026320.2-201ENST00000434379 478 ntBASIC16.55■□□□□ 0.24
SYN1P17600 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 MESTP3-201ENST00000503460 968 ntBASIC16.55■□□□□ 0.24
SYN1P17600 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.55■□□□□ 0.24
SYN1P17600 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SYN1P17600 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 AC005632.3-201ENST00000605544 308 ntBASIC16.55■□□□□ 0.24
SYN1P17600 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SYN1P17600 AC073911.3-201ENST00000624401 631 ntBASIC16.55■□□□□ 0.24
SYN1P17600 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.55■□□□□ 0.24
SYN1P17600 AC002472.3-201ENST00000640124 621 ntBASIC16.55■□□□□ 0.24
SYN1P17600 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.55■□□□□ 0.24
SYN1P17600 SHC1P1-201ENST00000425230 1745 ntBASIC16.55■□□□□ 0.24
SYN1P17600 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYN1P17600 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.55■□□□□ 0.24
SYN1P17600 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms