Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ITGA4P13612 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ITGA4P13612 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.96■□□□□ 0.31
ITGA4P13612 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.96■□□□□ 0.31
ITGA4P13612 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.96■□□□□ 0.31
ITGA4P13612 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.96■□□□□ 0.31
ITGA4P13612 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ITGA4P13612 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ITGA4P13612 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.96■□□□□ 0.31
ITGA4P13612 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITGA4P13612 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITGA4P13612 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITGA4P13612 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ITGA4P13612 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.96■□□□□ 0.3
ITGA4P13612 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ITGA4P13612 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.96■□□□□ 0.3
ITGA4P13612 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.96■□□□□ 0.3
ITGA4P13612 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ITGA4P13612 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ITGA4P13612 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ITGA4P13612 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
ITGA4P13612 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ITGA4P13612 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.95■□□□□ 0.3
ITGA4P13612 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ITGA4P13612 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ITGA4P13612 AL109954.1-202ENST00000564051 2148 ntBASIC16.95■□□□□ 0.3
ITGA4P13612 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.95■□□□□ 0.3
ITGA4P13612 AL022328.1-201ENST00000610050 478 ntBASIC16.95■□□□□ 0.3
ITGA4P13612 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ITGA4P13612 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ITGA4P13612 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.95■□□□□ 0.3
ITGA4P13612 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.95■□□□□ 0.3
ITGA4P13612 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.95■□□□□ 0.3
ITGA4P13612 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ITGA4P13612 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ITGA4P13612 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.94■□□□□ 0.3
ITGA4P13612 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.94■□□□□ 0.3
ITGA4P13612 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ITGA4P13612 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.94■□□□□ 0.3
ITGA4P13612 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.94■□□□□ 0.3
ITGA4P13612 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ITGA4P13612 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.94■□□□□ 0.3
ITGA4P13612 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.94■□□□□ 0.3
ITGA4P13612 RPS2P32-201ENST00000439199 892 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 AC026410.3-201ENST00000514280 936 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ITGA4P13612 AC104989.1-201ENST00000519711 778 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 AC068587.3-201ENST00000526613 355 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.94■□□□□ 0.3
ITGA4P13612 SNX29P1-201ENST00000548357 1007 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.94■□□□□ 0.3
ITGA4P13612 AP005482.1-201ENST00000563722 1273 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 AC009486.1-201ENST00000569860 813 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 CLUHP6-201ENST00000580789 941 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.94■□□□□ 0.3
ITGA4P13612 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ITGA4P13612 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 AC133552.6-201ENST00000613406 534 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.94■□□□□ 0.3
ITGA4P13612 MIR6775-201ENST00000617557 69 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
ITGA4P13612 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ITGA4P13612 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 DRD5P1-201ENST00000456605 1438 ntBASIC16.94■□□□□ 0.3
ITGA4P13612 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA4P13612 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms