Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.88□□□□□ -0.35
CTSDP07339 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.88□□□□□ -0.35
CTSDP07339 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.88□□□□□ -0.35
CTSDP07339 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.88□□□□□ -0.35
CTSDP07339 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.88□□□□□ -0.35
CTSDP07339 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CTSDP07339 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 AC092135.3-201ENST00000624151 1846 ntBASIC12.88□□□□□ -0.35
CTSDP07339 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CTSDP07339 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 AC015656.1-201ENST00000624209 3578 ntBASIC12.87□□□□□ -0.35
CTSDP07339 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 AL928921.2-201ENST00000641325 2442 ntBASIC12.87□□□□□ -0.35
CTSDP07339 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.87□□□□□ -0.35
CTSDP07339 AZGP1P1-201ENST00000411909 902 ntBASIC12.87□□□□□ -0.35
CTSDP07339 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.87□□□□□ -0.35
CTSDP07339 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 RNA5SP415-201ENST00000517246 115 ntBASIC12.87□□□□□ -0.35
CTSDP07339 AC112191.1-201ENST00000523689 701 ntBASIC12.87□□□□□ -0.35
CTSDP07339 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.87□□□□□ -0.35
CTSDP07339 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CTSDP07339 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.87□□□□□ -0.35
CTSDP07339 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.87□□□□□ -0.35
CTSDP07339 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 AC116407.3-201ENST00000623905 1129 ntBASIC12.87□□□□□ -0.35
CTSDP07339 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
CTSDP07339 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.87□□□□□ -0.35
CTSDP07339 AC126335.2-201ENST00000623362 4637 ntBASIC12.87□□□□□ -0.35
CTSDP07339 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 AC097359.2-201ENST00000604992 2389 ntBASIC12.87□□□□□ -0.35
CTSDP07339 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 AC018442.1-201ENST00000421439 2061 ntBASIC12.87□□□□□ -0.35
CTSDP07339 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 AC018529.2-202ENST00000611482 3087 ntBASIC12.87□□□□□ -0.35
CTSDP07339 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 HLA-A-201ENST00000376802 1334 ntBASIC12.87□□□□□ -0.35
CTSDP07339 AKAP8P1-201ENST00000434743 1349 ntBASIC12.87□□□□□ -0.35
CTSDP07339 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.87□□□□□ -0.35
CTSDP07339 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CTSDP07339 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CTSDP07339 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CTSDP07339 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms