Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.2□□□□□ -0.46
TRGV3P03979 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.2□□□□□ -0.46
TRGV3P03979 AC002472.2-201ENST00000442739 958 ntBASIC12.2□□□□□ -0.46
TRGV3P03979 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 TERF1P3-201ENST00000505638 1227 ntBASIC12.2□□□□□ -0.46
TRGV3P03979 AC093004.1-201ENST00000508850 424 ntBASIC12.2□□□□□ -0.46
TRGV3P03979 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.2□□□□□ -0.46
TRGV3P03979 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.2□□□□□ -0.46
TRGV3P03979 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 AC015910.1-201ENST00000579400 975 ntBASIC12.2□□□□□ -0.46
TRGV3P03979 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 RN7SL204P-201ENST00000582831 262 ntBASIC12.2□□□□□ -0.46
TRGV3P03979 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TRGV3P03979 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.2□□□□□ -0.46
TRGV3P03979 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRGV3P03979 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV3P03979 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRGV3P03979 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.19□□□□□ -0.46
TRGV3P03979 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.19□□□□□ -0.46
TRGV3P03979 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.19□□□□□ -0.46
TRGV3P03979 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.19□□□□□ -0.46
TRGV3P03979 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.19□□□□□ -0.46
TRGV3P03979 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
TRGV3P03979 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
TRGV3P03979 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.19□□□□□ -0.46
TRGV3P03979 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV3P03979 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms