Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.95□□□□□ -0.18
SPTA1P02549 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.95□□□□□ -0.18
SPTA1P02549 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.95□□□□□ -0.18
SPTA1P02549 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.95□□□□□ -0.18
SPTA1P02549 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.95□□□□□ -0.18
SPTA1P02549 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.95□□□□□ -0.18
SPTA1P02549 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.95□□□□□ -0.18
SPTA1P02549 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.95□□□□□ -0.18
SPTA1P02549 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
SPTA1P02549 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTA1P02549 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTA1P02549 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTA1P02549 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SPTA1P02549 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.94□□□□□ -0.18
SPTA1P02549 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.94□□□□□ -0.18
SPTA1P02549 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SPTA1P02549 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.94□□□□□ -0.18
SPTA1P02549 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTA1P02549 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTA1P02549 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTA1P02549 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SPTA1P02549 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPTA1P02549 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.94□□□□□ -0.18
SPTA1P02549 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.94□□□□□ -0.18
SPTA1P02549 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.94□□□□□ -0.18
SPTA1P02549 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTA1P02549 AL353770.1-201ENST00000614915 403 ntBASIC13.94□□□□□ -0.18
SPTA1P02549 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SPTA1P02549 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPTA1P02549 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTA1P02549 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.94□□□□□ -0.18
SPTA1P02549 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
SPTA1P02549 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPTA1P02549 AC105020.1-201ENST00000435356 2205 ntBASIC13.93□□□□□ -0.18
SPTA1P02549 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTA1P02549 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SPTA1P02549 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.93□□□□□ -0.18
SPTA1P02549 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPTA1P02549 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.93□□□□□ -0.18
SPTA1P02549 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.93□□□□□ -0.18
SPTA1P02549 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTA1P02549 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.93□□□□□ -0.18
SPTA1P02549 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
SPTA1P02549 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.93□□□□□ -0.18
SPTA1P02549 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.93□□□□□ -0.18
SPTA1P02549 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTA1P02549 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SPTA1P02549 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SPTA1P02549 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTA1P02549 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTA1P02549 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.93□□□□□ -0.18
SPTA1P02549 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTA1P02549 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms