Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR4O95977 CLK3P2-201ENST00000427566 1453 ntBASIC15.34■□□□□ 0.05
S1PR4O95977 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
S1PR4O95977 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 MRPS18AP1-201ENST00000414458 589 ntBASIC15.34■□□□□ 0.05
S1PR4O95977 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.34■□□□□ 0.05
S1PR4O95977 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR4O95977 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.34■□□□□ 0.05
S1PR4O95977 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR4O95977 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
S1PR4O95977 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.34■□□□□ 0.05
S1PR4O95977 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.34■□□□□ 0.05
S1PR4O95977 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.34■□□□□ 0.05
S1PR4O95977 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR4O95977 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
S1PR4O95977 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR4O95977 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.33■□□□□ 0.05
S1PR4O95977 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.33■□□□□ 0.05
S1PR4O95977 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.33■□□□□ 0.05
S1PR4O95977 AL359258.3-201ENST00000622910 2331 ntBASIC15.33■□□□□ 0.05
S1PR4O95977 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
S1PR4O95977 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.33■□□□□ 0.04
S1PR4O95977 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
S1PR4O95977 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.33■□□□□ 0.04
S1PR4O95977 FAM207CP-201ENST00000443486 507 ntBASIC15.33■□□□□ 0.04
S1PR4O95977 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.33■□□□□ 0.04
S1PR4O95977 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.33■□□□□ 0.04
S1PR4O95977 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.33■□□□□ 0.04
S1PR4O95977 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.33■□□□□ 0.04
S1PR4O95977 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
S1PR4O95977 AC004790.1-201ENST00000612686 536 ntBASIC15.33■□□□□ 0.04
S1PR4O95977 AC009118.2-201ENST00000613275 655 ntBASIC15.33■□□□□ 0.04
S1PR4O95977 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.33■□□□□ 0.04
S1PR4O95977 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.33■□□□□ 0.04
S1PR4O95977 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.33■□□□□ 0.04
S1PR4O95977 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.33■□□□□ 0.04
S1PR4O95977 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
S1PR4O95977 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.33■□□□□ 0.04
S1PR4O95977 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.33■□□□□ 0.04
S1PR4O95977 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
S1PR4O95977 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.32■□□□□ 0.04
S1PR4O95977 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
S1PR4O95977 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.32■□□□□ 0.04
S1PR4O95977 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.32■□□□□ 0.04
S1PR4O95977 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
S1PR4O95977 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
S1PR4O95977 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
S1PR4O95977 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
S1PR4O95977 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms