Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
PCDH17O14917 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDH17O14917 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 CICP24-201ENST00000605464 2705 ntBASIC14.8□□□□□ -0.04
PCDH17O14917 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDH17O14917 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH17O14917 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PCDH17O14917 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH17O14917 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDH17O14917 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH17O14917 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDH17O14917 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDH17O14917 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH17O14917 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH17O14917 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDH17O14917 MIR6752-201ENST00000618442 71 ntBASIC14.8□□□□□ -0.04
PCDH17O14917 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDH17O14917 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDH17O14917 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDH17O14917 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDH17O14917 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDH17O14917 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH17O14917 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 AC112693.3-201ENST00000624819 1983 ntBASIC14.8□□□□□ -0.04
PCDH17O14917 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDH17O14917 TCAF2P1-201ENST00000291129 2421 ntBASIC14.8□□□□□ -0.04
PCDH17O14917 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH17O14917 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH17O14917 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
PCDH17O14917 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDH17O14917 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDH17O14917 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH17O14917 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
PCDH17O14917 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.79□□□□□ -0.04
PCDH17O14917 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 MYCLP2-201ENST00000449268 967 ntBASIC14.79□□□□□ -0.04
PCDH17O14917 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH17O14917 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.79□□□□□ -0.04
PCDH17O14917 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH17O14917 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDH17O14917 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH17O14917 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 AC123567.1-201ENST00000548294 1261 ntBASIC14.79□□□□□ -0.04
PCDH17O14917 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH17O14917 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH17O14917 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH17O14917 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH17O14917 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH17O14917 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
PCDH17O14917 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH17O14917 AC007431.3-201ENST00000623221 587 ntBASIC14.79□□□□□ -0.04
PCDH17O14917 AC009090.5-201ENST00000624886 2285 ntBASIC14.79□□□□□ -0.04
PCDH17O14917 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDH17O14917 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH17O14917 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms