Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.86□□□□□ -0.19
COPS3Q9UNS2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 AC005840.4-201ENST00000541242 2494 ntBASIC13.86□□□□□ -0.19
COPS3Q9UNS2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.86□□□□□ -0.19
COPS3Q9UNS2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 HIST3H2BA-201ENST00000436555 524 ntBASIC13.85□□□□□ -0.19
COPS3Q9UNS2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
COPS3Q9UNS2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 ACE3P-201ENST00000423435 1973 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms