Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM1Q9HBL6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 AL133267.1-201ENST00000398220 340 ntBASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 RPL37AP1-201ENST00000412502 279 ntBASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 AC004967.1-201ENST00000453589 447 ntBASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 AC069262.1-201ENST00000539058 672 ntBASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 ACE3P-201ENST00000423435 1973 ntBASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM1Q9HBL6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 AL365209.1-201ENST00000624418 6473 ntBASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 AC232323.1-201ENST00000540724 2099 ntBASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 REXO1L5P-201ENST00000622260 2098 ntBASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 AC011467.4-201ENST00000594891 528 ntBASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms