Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 AC084364.1-201ENST00000551967 1556 ntBASIC19.06■□□□□ 0.64
UPF2Q9HAU5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 AC142381.1-201ENST00000426099 345 ntBASIC19.05■□□□□ 0.64
UPF2Q9HAU5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 PDPK2P-202ENST00000562415 1191 ntBASIC19.05■□□□□ 0.64
UPF2Q9HAU5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 AC099522.2-201ENST00000607001 744 ntBASIC19.05■□□□□ 0.64
UPF2Q9HAU5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 AL607033.1-201ENST00000623900 1599 ntBASIC19.05■□□□□ 0.64
UPF2Q9HAU5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPF2Q9HAU5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 DKFZP434A062-201ENST00000573103 5021 ntBASIC19.04■□□□□ 0.64
UPF2Q9HAU5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 AC004870.1-201ENST00000315132 882 ntBASIC19.04■□□□□ 0.64
UPF2Q9HAU5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 AC136604.1-201ENST00000418535 575 ntBASIC19.04■□□□□ 0.64
UPF2Q9HAU5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 AP001005.1-201ENST00000571755 1248 ntBASIC19.04■□□□□ 0.64
UPF2Q9HAU5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF2Q9HAU5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 CICP4-201ENST00000447359 2812 ntBASIC19.03■□□□□ 0.64
UPF2Q9HAU5 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 KRT18P56-201ENST00000507275 550 ntBASIC19.03■□□□□ 0.64
UPF2Q9HAU5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 AC011467.4-201ENST00000594891 528 ntBASIC19.03■□□□□ 0.64
UPF2Q9HAU5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 REXO1L2P-201ENST00000425429 2069 ntBASIC19.03■□□□□ 0.64
UPF2Q9HAU5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms