Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 METTL21AP1-201ENST00000438852 635 ntBASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 COX20P2-201ENST00000452636 358 ntBASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHAMP1Q96JM3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 REXO1L4P-201ENST00000605109 1937 ntBASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 ALG1L8P-201ENST00000533887 760 ntBASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 KRT8P23-201ENST00000560090 1207 ntBASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHAMP1Q96JM3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 WASH3P-207ENST00000560956 1394 ntBASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 FO538757.1-201ENST00000623083 1397 ntBASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 DNAJB3-202ENST00000449667 1266 ntBASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 CYMP-203ENST00000474680 1263 ntBASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 AC011467.4-201ENST00000594891 528 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms