Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.31□□□□□ -0.12
HPS1Q92902 AC009948.4-201ENST00000604692 675 ntBASIC14.31□□□□□ -0.12
HPS1Q92902 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 AP001350.2-201ENST00000625104 1094 ntBASIC14.31□□□□□ -0.12
HPS1Q92902 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 TCAF1P1-201ENST00000414990 2232 ntBASIC14.31□□□□□ -0.12
HPS1Q92902 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 AC069224.1-201ENST00000566372 1715 ntBASIC14.3□□□□□ -0.12
HPS1Q92902 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.3□□□□□ -0.12
HPS1Q92902 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.3□□□□□ -0.12
HPS1Q92902 SLC25A6P2-201ENST00000497974 877 ntBASIC14.3□□□□□ -0.12
HPS1Q92902 AP000344.2-201ENST00000512987 629 ntBASIC14.3□□□□□ -0.12
HPS1Q92902 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.3□□□□□ -0.12
HPS1Q92902 AP002472.1-201ENST00000577490 586 ntBASIC14.3□□□□□ -0.12
HPS1Q92902 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC14.3□□□□□ -0.12
HPS1Q92902 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
HPS1Q92902 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.3□□□□□ -0.12
HPS1Q92902 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.3□□□□□ -0.12
HPS1Q92902 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 AC025580.3-201ENST00000617932 1424 ntBASIC14.3□□□□□ -0.12
HPS1Q92902 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HPS1Q92902 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HPS1Q92902 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.3□□□□□ -0.12
HPS1Q92902 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HPS1Q92902 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HPS1Q92902 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.29□□□□□ -0.12
HPS1Q92902 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.29□□□□□ -0.12
HPS1Q92902 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.29□□□□□ -0.12
HPS1Q92902 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.29□□□□□ -0.12
HPS1Q92902 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.29□□□□□ -0.12
HPS1Q92902 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HPS1Q92902 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.29□□□□□ -0.12
HPS1Q92902 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HPS1Q92902 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.29□□□□□ -0.12
HPS1Q92902 HCG4-201ENST00000418983 998 ntBASIC14.29□□□□□ -0.12
HPS1Q92902 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms