Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 UPK3BP1-201ENST00000428678 509 ntBASIC13.99□□□□□ -0.17
APH1BQ8WW43 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 AC027307.2-201ENST00000591252 911 ntBASIC13.99□□□□□ -0.17
APH1BQ8WW43 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
APH1BQ8WW43 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APH1BQ8WW43 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 RNA5SP415-201ENST00000517246 115 ntBASIC13.98□□□□□ -0.17
APH1BQ8WW43 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 AC008267.7-201ENST00000624570 1194 ntBASIC13.98□□□□□ -0.17
APH1BQ8WW43 OR2I1P-210ENST00000642037 4691 ntBASIC13.98□□□□□ -0.17
APH1BQ8WW43 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.98□□□□□ -0.17
APH1BQ8WW43 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APH1BQ8WW43 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms