Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 GHSR-202ENST00000427970 912 ntBASIC14.49□□□□□ -0.09
NUP43Q8NFH3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 MEIS3P1-201ENST00000495167 958 ntBASIC14.49□□□□□ -0.09
NUP43Q8NFH3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NUP43Q8NFH3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 BASP1P1-201ENST00000430708 665 ntBASIC14.48□□□□□ -0.09
NUP43Q8NFH3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AC092183.1-201ENST00000469884 875 ntBASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AL390955.2-201ENST00000603032 514 ntBASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AC000095.1-201ENST00000603208 874 ntBASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AC008738.7-201ENST00000609744 511 ntBASIC14.48□□□□□ -0.09
NUP43Q8NFH3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AC004840.1-201ENST00000636359 365 ntBASIC14.48□□□□□ -0.09
NUP43Q8NFH3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.48□□□□□ -0.09
NUP43Q8NFH3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NUP43Q8NFH3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms