Protein–RNA interactions for Protein: Q8N7F7

UBL4B, Ubiquitin-like protein 4B, humanhuman

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4BQ8N7F7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 AL627223.1-201ENST00000416693 442 ntBASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 FAM58DP-201ENST00000428076 619 ntBASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 MTND6P24-201ENST00000440466 518 ntBASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 POLD2P1-201ENST00000511220 997 ntBASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 AL133215.2-201ENST00000609242 977 ntBASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 AL513210.1-201ENST00000629608 234 ntBASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4BQ8N7F7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 CICP14-201ENST00000629111 2732 ntBASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 RBPMS2P1-201ENST00000437762 623 ntBASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SLED1-202ENST00000512051 380 ntBASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SNX18-202ENST00000343017 3140 ntBASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4BQ8N7F7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 MIR574-201ENST00000385209 96 ntBASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.3■□□□□ 0.2
UBL4BQ8N7F7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms