Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 AC099063.4-201ENST00000641099 1602 ntBASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHTF2Q8N3S3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 AC022494.1-201ENST00000466044 728 ntBASIC16■□□□□ 0.15
PHTF2Q8N3S3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHTF2Q8N3S3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PHTF2Q8N3S3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 REXO1L6P-201ENST00000603433 1515 ntBASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AC136621.1-201ENST00000624017 2304 ntBASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AC099336.1-201ENST00000417053 1171 ntBASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 KLF2P4-201ENST00000451959 1225 ntBASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AC092658.1-201ENST00000505836 891 ntBASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHTF2Q8N3S3 SSR4P1-203ENST00000599569 2260 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms