Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 AC023090.2-201ENST00000625182 2110 ntBASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 PI4KAP1-204ENST00000612579 1703 ntBASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 AC020658.7-201ENST00000624274 2442 ntBASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CROCCP3Q8IVE0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CROCCP3Q8IVE0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.08□□□□□ -0.15
CROCCP3Q8IVE0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.08□□□□□ -0.15
CROCCP3Q8IVE0 WASH6P-202ENST00000359512 1437 ntBASIC14.08□□□□□ -0.15
CROCCP3Q8IVE0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CROCCP3Q8IVE0 AL031595.1-201ENST00000623969 4709 ntBASIC14.08□□□□□ -0.15
CROCCP3Q8IVE0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 AL136038.3-201ENST00000561909 1096 ntBASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 AC073548.1-201ENST00000624088 1882 ntBASIC14.08□□□□□ -0.16
CROCCP3Q8IVE0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 DRAXINP1-201ENST00000437611 948 ntBASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 AC021097.1-201ENST00000607902 574 ntBASIC14.07□□□□□ -0.16
CROCCP3Q8IVE0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms