Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AC018529.2-202ENST00000611482 3087 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AP3S2-216ENST00000617003 1561 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 LINC01230-201ENST00000625222 3017 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 HLA-A-201ENST00000376802 1334 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 INTS4P1-203ENST00000641008 3683 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AC097376.2-205ENST00000610159 5334 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 ADH5P3-201ENST00000433842 1137 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 RN7SL589P-201ENST00000481268 310 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 FAM86C2P-203ENST00000528684 1004 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AC091812.2-201ENST00000619081 385 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 AC136759.1-202ENST00000530858 2194 ntBASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRTM1Q86UE6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRTM1Q86UE6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 HIST3H2BA-201ENST00000436555 524 ntBASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms