Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 AC245100.3-201ENST00000441281 285 ntBASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 HLA-V-204ENST00000476601 1289 ntBASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 AL138828.2-201ENST00000615812 383 ntBASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRFAM7AQ494W8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 AP006294.1-201ENST00000415407 339 ntBASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 RPS2P32-201ENST00000439199 892 ntBASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 AC011495.1-201ENST00000498085 584 ntBASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 RARRES2P9-201ENST00000565168 469 ntBASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 AC007967.4-201ENST00000614700 386 ntBASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 MIR6805-201ENST00000615055 62 ntBASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 FAM45BP-202ENST00000592932 1624 ntBASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms