Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 AL353637.1-201ENST00000451571 732 ntBASIC21.66■■□□□ 1.06
SPHKAPQ2M3C7 RPL18P13-201ENST00000478088 569 ntBASIC21.66■■□□□ 1.06
SPHKAPQ2M3C7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC21.66■■□□□ 1.06
SPHKAPQ2M3C7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.66■■□□□ 1.06
SPHKAPQ2M3C7 PCDHA1-201ENST00000378133 2726 ntBASIC21.66■■□□□ 1.06
SPHKAPQ2M3C7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 KRT8P21-201ENST00000430398 1491 ntBASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 AC078875.1-201ENST00000431907 724 ntBASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 AL133466.1-201ENST00000447582 150 ntBASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 FTLP1-201ENST00000449155 526 ntBASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 AC006122.1-201ENST00000493323 440 ntBASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC21.65■■□□□ 1.06
SPHKAPQ2M3C7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 SNORD3B-2-202ENST00000571722 791 ntBASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC21.64■■□□□ 1.06
SPHKAPQ2M3C7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 ZBED1P1-201ENST00000502364 1930 ntBASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC21.64■■□□□ 1.05
SPHKAPQ2M3C7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 MIR4754-201ENST00000582477 89 ntBASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 SPCS2P2-201ENST00000603270 608 ntBASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 CYP4F23P-201ENST00000593402 1579 ntBASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 AC008805.1-201ENST00000590892 364 ntBASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHKAPQ2M3C7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPHKAPQ2M3C7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms