Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SEC61A1P61619 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
SEC61A1P61619 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
SEC61A1P61619 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.64□□□□□ -0.23
SEC61A1P61619 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SEC61A1P61619 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.64□□□□□ -0.23
SEC61A1P61619 MIR943-201ENST00000401286 94 ntBASIC13.64□□□□□ -0.23
SEC61A1P61619 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.64□□□□□ -0.23
SEC61A1P61619 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.64□□□□□ -0.23
SEC61A1P61619 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.64□□□□□ -0.23
SEC61A1P61619 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.64□□□□□ -0.23
SEC61A1P61619 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC61A1P61619 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SEC61A1P61619 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SEC61A1P61619 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SEC61A1P61619 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 AC117489.1-201ENST00000625169 3217 ntBASIC13.63□□□□□ -0.23
SEC61A1P61619 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SEC61A1P61619 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
SEC61A1P61619 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.63□□□□□ -0.23
SEC61A1P61619 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.63□□□□□ -0.23
SEC61A1P61619 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.63□□□□□ -0.23
SEC61A1P61619 TREML5P-201ENST00000421694 576 ntBASIC13.63□□□□□ -0.23
SEC61A1P61619 AC107890.1-201ENST00000422478 521 ntBASIC13.63□□□□□ -0.23
SEC61A1P61619 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.63□□□□□ -0.23
SEC61A1P61619 AC093214.1-201ENST00000511688 1107 ntBASIC13.63□□□□□ -0.23
SEC61A1P61619 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms