Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC10.96□□□□□ -0.65
CKS1BP61024 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CKS1BP61024 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CKS1BP61024 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CKS1BP61024 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC10.96□□□□□ -0.65
CKS1BP61024 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CKS1BP61024 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CKS1BP61024 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CKS1BP61024 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.96□□□□□ -0.65
CKS1BP61024 DPM2-202ENST00000373110 738 ntTSL 2 BASIC10.96□□□□□ -0.65
CKS1BP61024 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CKS1BP61024 PMS2P1-201ENST00000431037 1228 ntBASIC10.96□□□□□ -0.65
CKS1BP61024 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
CKS1BP61024 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.96□□□□□ -0.65
CKS1BP61024 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC10.96□□□□□ -0.65
CKS1BP61024 ARTN-206ENST00000472435 402 ntTSL 3 BASIC10.96□□□□□ -0.65
CKS1BP61024 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC10.96□□□□□ -0.65
CKS1BP61024 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CKS1BP61024 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC10.96□□□□□ -0.65
CKS1BP61024 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC10.96□□□□□ -0.65
CKS1BP61024 MTDHP4-201ENST00000600287 670 ntBASIC10.96□□□□□ -0.65
CKS1BP61024 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
CKS1BP61024 WT1-AS_2.1-201ENST00000613208 137 ntBASIC10.96□□□□□ -0.65
CKS1BP61024 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC10.96□□□□□ -0.65
CKS1BP61024 REXO1L3P-201ENST00000622202 1288 ntBASIC10.96□□□□□ -0.65
CKS1BP61024 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CKS1BP61024 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC10.96□□□□□ -0.65
CKS1BP61024 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
CKS1BP61024 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
CKS1BP61024 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC10.96□□□□□ -0.66
CKS1BP61024 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 SSR4P1-203ENST00000599569 2260 ntBASIC10.96□□□□□ -0.66
CKS1BP61024 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
CKS1BP61024 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.96□□□□□ -0.66
CKS1BP61024 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CKS1BP61024 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 AC005622.1-201ENST00000636801 1703 ntBASIC10.95□□□□□ -0.66
CKS1BP61024 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CKS1BP61024 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC10.95□□□□□ -0.66
CKS1BP61024 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC10.95□□□□□ -0.66
CKS1BP61024 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC10.95□□□□□ -0.66
CKS1BP61024 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC10.95□□□□□ -0.66
CKS1BP61024 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 MIR3180-1-201ENST00000580374 94 ntBASIC10.95□□□□□ -0.66
CKS1BP61024 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC10.95□□□□□ -0.66
CKS1BP61024 MIR3180-3-201ENST00000584616 94 ntBASIC10.95□□□□□ -0.66
CKS1BP61024 SDCCAG3P1-201ENST00000589292 1150 ntBASIC10.95□□□□□ -0.66
CKS1BP61024 AC006557.2-201ENST00000592985 1240 ntBASIC10.95□□□□□ -0.66
CKS1BP61024 LINC01711-201ENST00000598340 967 ntBASIC10.95□□□□□ -0.66
CKS1BP61024 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms