Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.96□□□□□ -0.17
SUMO3P55854 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SUMO3P55854 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 AC098614.1-201ENST00000368528 745 ntBASIC13.96□□□□□ -0.17
SUMO3P55854 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SUMO3P55854 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.96□□□□□ -0.17
SUMO3P55854 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.96□□□□□ -0.17
SUMO3P55854 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.96□□□□□ -0.17
SUMO3P55854 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.96□□□□□ -0.17
SUMO3P55854 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.96□□□□□ -0.17
SUMO3P55854 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.96□□□□□ -0.17
SUMO3P55854 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SUMO3P55854 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.96□□□□□ -0.17
SUMO3P55854 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.96□□□□□ -0.17
SUMO3P55854 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.96□□□□□ -0.17
SUMO3P55854 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SUMO3P55854 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.96□□□□□ -0.17
SUMO3P55854 PRSS30P-206ENST00000641773 873 ntBASIC13.96□□□□□ -0.17
SUMO3P55854 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SUMO3P55854 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.96□□□□□ -0.17
SUMO3P55854 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SUMO3P55854 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SUMO3P55854 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SUMO3P55854 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.96□□□□□ -0.18
SUMO3P55854 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SUMO3P55854 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.95□□□□□ -0.18
SUMO3P55854 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SUMO3P55854 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SUMO3P55854 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.95□□□□□ -0.18
SUMO3P55854 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.95□□□□□ -0.18
SUMO3P55854 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SUMO3P55854 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.95□□□□□ -0.18
SUMO3P55854 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.95□□□□□ -0.18
SUMO3P55854 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.95□□□□□ -0.18
SUMO3P55854 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.95□□□□□ -0.18
SUMO3P55854 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.95□□□□□ -0.18
SUMO3P55854 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 WASH4P-201ENST00000564273 1246 ntBASIC13.95□□□□□ -0.18
SUMO3P55854 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.95□□□□□ -0.18
SUMO3P55854 WFDC1-204ENST00000613603 549 ntBASIC13.95□□□□□ -0.18
SUMO3P55854 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SUMO3P55854 AL358472.5-202ENST00000641448 1267 ntBASIC13.95□□□□□ -0.18
SUMO3P55854 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
SUMO3P55854 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SUMO3P55854 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 AL360270.3-201ENST00000609118 1348 ntBASIC13.94□□□□□ -0.18
SUMO3P55854 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SUMO3P55854 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SUMO3P55854 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms