Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ATP1B3P54709 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ATP1B3P54709 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.49□□□□□ -0.25
ATP1B3P54709 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ATP1B3P54709 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
ATP1B3P54709 KRT8P44-201ENST00000441609 1350 ntBASIC13.49□□□□□ -0.25
ATP1B3P54709 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ATP1B3P54709 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
ATP1B3P54709 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.49□□□□□ -0.25
ATP1B3P54709 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ATP1B3P54709 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.49□□□□□ -0.25
ATP1B3P54709 AL627223.1-201ENST00000416693 442 ntBASIC13.49□□□□□ -0.25
ATP1B3P54709 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.49□□□□□ -0.25
ATP1B3P54709 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.49□□□□□ -0.25
ATP1B3P54709 RBPMS2P1-201ENST00000437762 623 ntBASIC13.49□□□□□ -0.25
ATP1B3P54709 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.49□□□□□ -0.25
ATP1B3P54709 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.49□□□□□ -0.25
ATP1B3P54709 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.49□□□□□ -0.25
ATP1B3P54709 MIR4469-201ENST00000583919 79 ntBASIC13.49□□□□□ -0.25
ATP1B3P54709 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.49□□□□□ -0.25
ATP1B3P54709 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.49□□□□□ -0.25
ATP1B3P54709 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.49□□□□□ -0.25
ATP1B3P54709 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.49□□□□□ -0.25
ATP1B3P54709 AL513210.1-201ENST00000629608 234 ntBASIC13.49□□□□□ -0.25
ATP1B3P54709 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.49□□□□□ -0.25
ATP1B3P54709 AC148477.4-201ENST00000613430 1793 ntBASIC13.49□□□□□ -0.25
ATP1B3P54709 AC013726.1-201ENST00000563747 2285 ntBASIC13.49□□□□□ -0.25
ATP1B3P54709 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ATP1B3P54709 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATP1B3P54709 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ATP1B3P54709 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.49□□□□□ -0.25
ATP1B3P54709 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ATP1B3P54709 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
ATP1B3P54709 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 AL035456.1-201ENST00000456064 1369 ntBASIC13.48□□□□□ -0.25
ATP1B3P54709 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
ATP1B3P54709 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.48□□□□□ -0.25
ATP1B3P54709 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.48□□□□□ -0.25
ATP1B3P54709 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 AC004461.1-201ENST00000412461 403 ntBASIC13.48□□□□□ -0.25
ATP1B3P54709 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.48□□□□□ -0.25
ATP1B3P54709 AP000344.2-201ENST00000512987 629 ntBASIC13.48□□□□□ -0.25
ATP1B3P54709 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.48□□□□□ -0.25
ATP1B3P54709 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.48□□□□□ -0.25
ATP1B3P54709 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ATP1B3P54709 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms