Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SMSP52788 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 AC017083.2-201ENST00000608069 979 ntBASIC14.58□□□□□ -0.08
SMSP52788 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.58□□□□□ -0.08
SMSP52788 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.58□□□□□ -0.08
SMSP52788 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.58□□□□□ -0.08
SMSP52788 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SMSP52788 AC134407.2-201ENST00000625089 1978 ntBASIC14.58□□□□□ -0.08
SMSP52788 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMSP52788 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.58□□□□□ -0.08
SMSP52788 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMSP52788 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.57□□□□□ -0.08
SMSP52788 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.57□□□□□ -0.08
SMSP52788 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SMSP52788 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.57□□□□□ -0.08
SMSP52788 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMSP52788 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SMSP52788 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
SMSP52788 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 SERBP1P3-201ENST00000459980 809 ntBASIC14.57□□□□□ -0.08
SMSP52788 RN7SL618P-201ENST00000477850 296 ntBASIC14.57□□□□□ -0.08
SMSP52788 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.57□□□□□ -0.08
SMSP52788 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.57□□□□□ -0.08
SMSP52788 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.57□□□□□ -0.08
SMSP52788 AL844908.2-201ENST00000609461 460 ntBASIC14.57□□□□□ -0.08
SMSP52788 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
SMSP52788 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.57□□□□□ -0.08
SMSP52788 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SMSP52788 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SMSP52788 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMSP52788 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMSP52788 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SMSP52788 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.56□□□□□ -0.08
SMSP52788 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.56□□□□□ -0.08
SMSP52788 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.56□□□□□ -0.08
SMSP52788 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.56□□□□□ -0.08
SMSP52788 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 AC073439.1-201ENST00000624121 1774 ntBASIC14.56□□□□□ -0.08
SMSP52788 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.56□□□□□ -0.08
SMSP52788 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMSP52788 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SMSP52788 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.56□□□□□ -0.08
SMSP52788 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.56□□□□□ -0.08
SMSP52788 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.56□□□□□ -0.08
SMSP52788 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.56□□□□□ -0.08
SMSP52788 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.56□□□□□ -0.08
SMSP52788 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMSP52788 AC093004.1-201ENST00000508850 424 ntBASIC14.56□□□□□ -0.08
SMSP52788 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms