Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 KRT8P31-201ENST00000504812 1408 ntBASIC17.21■□□□□ 0.35
TM4SF4P48230 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
TM4SF4P48230 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TM4SF4P48230 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.21■□□□□ 0.35
TM4SF4P48230 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.21■□□□□ 0.35
TM4SF4P48230 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TM4SF4P48230 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.21■□□□□ 0.35
TM4SF4P48230 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.21■□□□□ 0.35
TM4SF4P48230 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.21■□□□□ 0.35
TM4SF4P48230 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 FTH1P22-201ENST00000456305 520 ntBASIC17.21■□□□□ 0.35
TM4SF4P48230 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.21■□□□□ 0.35
TM4SF4P48230 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.21■□□□□ 0.35
TM4SF4P48230 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.21■□□□□ 0.35
TM4SF4P48230 AC006122.1-201ENST00000493323 440 ntBASIC17.21■□□□□ 0.35
TM4SF4P48230 AC026410.1-201ENST00000507366 1101 ntBASIC17.21■□□□□ 0.35
TM4SF4P48230 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TM4SF4P48230 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TM4SF4P48230 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.21■□□□□ 0.35
TM4SF4P48230 AC006158.1-201ENST00000610661 249 ntBASIC17.21■□□□□ 0.35
TM4SF4P48230 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.21■□□□□ 0.35
TM4SF4P48230 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.21■□□□□ 0.35
TM4SF4P48230 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM4SF4P48230 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.21■□□□□ 0.35
TM4SF4P48230 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.21■□□□□ 0.35
TM4SF4P48230 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TM4SF4P48230 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TM4SF4P48230 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.21■□□□□ 0.34
TM4SF4P48230 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TM4SF4P48230 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
TM4SF4P48230 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
TM4SF4P48230 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TM4SF4P48230 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.2■□□□□ 0.34
TM4SF4P48230 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 AC106820.2-201ENST00000563775 3264 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 AC127383.1-201ENST00000444697 1800 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.2■□□□□ 0.34
TM4SF4P48230 AL354861.1-201ENST00000445213 355 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 ORAOV1P1-201ENST00000503108 395 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 ALG3P1-201ENST00000508806 1114 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.2■□□□□ 0.34
TM4SF4P48230 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.2■□□□□ 0.34
TM4SF4P48230 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.2■□□□□ 0.34
TM4SF4P48230 AC011247.3-201ENST00000603297 438 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 AC027601.3-201ENST00000622907 509 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 MST1L-201ENST00000442552 2185 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 HCG11-201ENST00000411553 5696 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.2■□□□□ 0.34
TM4SF4P48230 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TM4SF4P48230 IL9RP3-201ENST00000442856 1674 ntBASIC17.2■□□□□ 0.34
TM4SF4P48230 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.19■□□□□ 0.34
TM4SF4P48230 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.19■□□□□ 0.34
TM4SF4P48230 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 AC004837.1-201ENST00000446267 564 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms