Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC2P35250 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RFC2P35250 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC2P35250 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC2P35250 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC2P35250 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC2P35250 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 AC092171.3-201ENST00000610122 2651 ntBASIC16.59■□□□□ 0.25
RFC2P35250 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
RFC2P35250 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFC2P35250 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC2P35250 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RFC2P35250 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 AL596276.2-201ENST00000447525 331 ntBASIC16.59■□□□□ 0.25
RFC2P35250 MARK2P5-201ENST00000507649 634 ntBASIC16.59■□□□□ 0.25
RFC2P35250 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC2P35250 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC2P35250 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC2P35250 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC2P35250 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC2P35250 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFC2P35250 AL136295.7-201ENST00000619226 1200 ntBASIC16.59■□□□□ 0.25
RFC2P35250 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC2P35250 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC2P35250 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC2P35250 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.58■□□□□ 0.25
RFC2P35250 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC2P35250 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.58■□□□□ 0.25
RFC2P35250 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC2P35250 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.58■□□□□ 0.25
RFC2P35250 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.58■□□□□ 0.25
RFC2P35250 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC2P35250 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RFC2P35250 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC2P35250 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
RFC2P35250 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RFC2P35250 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.58■□□□□ 0.25
RFC2P35250 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RFC2P35250 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC2P35250 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RFC2P35250 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC2P35250 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC2P35250 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RFC2P35250 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 AC012618.1-201ENST00000461223 412 ntBASIC16.58■□□□□ 0.24
RFC2P35250 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC2P35250 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 MIR5572-201ENST00000583188 137 ntBASIC16.58■□□□□ 0.24
RFC2P35250 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC2P35250 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC2P35250 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 CLUHP2-201ENST00000426660 1303 ntBASIC16.58■□□□□ 0.24
RFC2P35250 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 AC069224.1-201ENST00000566372 1715 ntBASIC16.58■□□□□ 0.24
RFC2P35250 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC2P35250 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
RFC2P35250 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC2P35250 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFC2P35250 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RFC2P35250 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC2P35250 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC2P35250 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC2P35250 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC2P35250 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC2P35250 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC2P35250 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC2P35250 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC2P35250 AC055811.4-201ENST00000624039 1754 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms