Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CHMP24386 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP24386 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.52□□□□□ -0.08
CHMP24386 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CHMP24386 CYP4F24P-201ENST00000586049 1580 ntBASIC14.52□□□□□ -0.08
CHMP24386 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP24386 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP24386 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.52□□□□□ -0.08
CHMP24386 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP24386 AL691432.1-201ENST00000596308 1422 ntBASIC14.52□□□□□ -0.08
CHMP24386 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.52□□□□□ -0.08
CHMP24386 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP24386 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP24386 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CHMP24386 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 FO393414.2-201ENST00000405153 598 ntBASIC14.52□□□□□ -0.09
CHMP24386 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.52□□□□□ -0.09
CHMP24386 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.52□□□□□ -0.09
CHMP24386 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.52□□□□□ -0.09
CHMP24386 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.52□□□□□ -0.09
CHMP24386 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.52□□□□□ -0.09
CHMP24386 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 LINC02084-201ENST00000606069 1096 ntBASIC14.52□□□□□ -0.09
CHMP24386 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.52□□□□□ -0.09
CHMP24386 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.52□□□□□ -0.09
CHMP24386 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CHMP24386 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.52□□□□□ -0.09
CHMP24386 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.52□□□□□ -0.09
CHMP24386 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.52□□□□□ -0.09
CHMP24386 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.52□□□□□ -0.09
CHMP24386 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP24386 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.51□□□□□ -0.09
CHMP24386 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHMP24386 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CHMP24386 AC007686.3-201ENST00000619017 3487 ntBASIC14.51□□□□□ -0.09
CHMP24386 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.51□□□□□ -0.09
CHMP24386 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CHMP24386 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.51□□□□□ -0.09
CHMP24386 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.51□□□□□ -0.09
CHMP24386 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.51□□□□□ -0.09
CHMP24386 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 ZNF890P-202ENST00000530367 1156 ntBASIC14.51□□□□□ -0.09
CHMP24386 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.51□□□□□ -0.09
CHMP24386 MIR6069-201ENST00000620069 79 ntBASIC14.51□□□□□ -0.09
CHMP24386 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CHMP24386 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.51□□□□□ -0.09
CHMP24386 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHMP24386 AC022144.1-201ENST00000602255 1580 ntBASIC14.51□□□□□ -0.09
CHMP24386 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.51□□□□□ -0.09
CHMP24386 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHMP24386 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms